Bardaje did not go for a breakaway and instead he closely guarded the other title contenders including Richard Patalinghug, who finished with 56 points for second place.
The final leg saw Dexter Lapuz on top and he was trailed by John Ermitanio while Patalinghug came out third and Ian Colina at fourth place while Bardaje was fifth placer.
John Ermitanio landed third overall with 50 points in the Spark Kleen Laundry Power and Bikehub-sponsored event.